BLASTN 2

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BLASTN 2.1.1 [Aug-8-2000]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 972636388-24843-11386

Query= (832 letters)

Database: nt 695,795 sequences; 2,385,885,539 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs

Taxonomy reports

Distribution of 61 Blast Hits on the Query Sequence

Alignments

>dbj|AB032566.1|AB032566 Oncorhynchus mykiss vas mRNA for Vasa, complete cds
          Length = 2612

 Score =  331 bits (167), Expect = 3e-88
 Identities = 472/571 (82%), Gaps = 2/571 (0%)
 Strand = Plus / Plus

                                                                        
Query: 262  tgcaatgtgctttgtggaactcccgggagactgttggatatgatcggaagaggaaagatt 321
            ||||||||||| ||||  ||||| || |||||| |||| || || |||||||||||||||
Sbjct: 1070 tgcaatgtgctgtgtgcgactccaggaagactgatggacattattggaagaggaaagatt 1129

                                                                        
Query: 322  gggctgactaaactgcggtactttgtgctggatgaggctgaccggatgctggacatgggc 381
            ||  |||  || ||||| ||| | |||||||| ||||||||| |||||||||||||||||
Sbjct: 1130 ggcttgagcaagctgcgttacctggtgctggacgaggctgacaggatgctggacatgggc 1189

                                                                        
Query: 382  tttgagcctgcgatggcgcaagctggtggggtccccaggcataccagctaaagaggatcg 441
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 tttgagcctgcgatg-cgcaagctggtggggtccccaggcataccagctaaagaggatcg 1248

                                                                        
Query: 442  ccagaccctaatgttcagcgctacctaccctgatgacatccaaaggatggcggttgactt 501
            ||||||||| |||||||||||||||||||| || ||||||||||   |||| | ||||||
Sbjct: 1249 ccagacccttatgttcagcgctacctaccccgaggacatccaaaaactggctgctgactt 1308

                                                                        
Query: 502  tctcaaagacggactatttgttcctggctgtcggtgtggtgggcacagcctgcagtgatg 561
             ||  |||| ||||||| ||||||| ||||| ||||||||||||  ||||||||||||||
Sbjct: 1309 cct-gaagaaggactatctgttccttgctgtgggtgtggtgggcggagcctgcagtgatg 1367

                                                                        
Query: 562  aggagcagacatttgtccaggtcaccaagttctccaagagggagcagcttcttgacctcc 621
             |||||||    | || ||||| |||||||||||||| || || || || || ||  |||
Sbjct: 1368 tggagcaggtcgtggttcaggtgaccaagttctccaaaagagaccaactactggaggtcc 1427

                                                                        
Query: 622  tcaaaacaacaggaacggagcgtaccatggtgtttgttgagaccaagaggcaagctgatt 681
            | || || |||||  | || || || ||||| ||||| || ||||||||||| ||||| |
Sbjct: 1428 tgaagactacagggtctgaacgcacaatggtctttgtggaaaccaagaggcaggctgact 1487

                                                                        
Query: 682  ttattgccacctacttgtgccaggagaaggttccaactagcagcattcatggacaccgtg 741
            |||| || || | | |||| | ||||||||||   ||||  || ||||| ||  ||||||
Sbjct: 1488 ttatagcaacgttcctgtgtcgggagaaggttaatactactagtattcacggtgaccgtg 1547

                                                                        
Query: 742  agcagcgggagcgagagcaggctctggctgactttcgctctggcaagtgtccagtcatgg 801
            ||||| ||||||| || ||||| || |  ||||| ||||| || | |||||| ||| |||
Sbjct: 1548 agcagagggagcgtgaacaggcgctcggcgacttccgctccggaaggtgtcctgtcctgg 1607

                                           
Query: 802  tggcgacctctgtagctgcccgtggactgga 832
            |||| |||||||| |||||||| ||||||||
Sbjct: 1608 tggccacctctgttgctgcccgcggactgga 1638

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 161/203 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggcttgtgcgcatacgggatctggtttaacggctgcattcctgctccctattctgcag 60
            ||||| ||||| || || ||||||||   ||||||||||||| | || || || ||||||
Sbjct: 809  atggcctgtgcccagactggatctgggaaaacggctgcattcttactgcccatcctgcag 868

                                                                        
Query: 61   cagttgatggctgacggtgtggcagccagttccttcagtgagctgctggagcctgaagca 120
            ||| ||||||  ||||| |||||||| |||   ||||| ||| | | |||||| || |  
Sbjct: 869  cagctgatggtggacggcgtggcagctagtcagttcagcgagatccaggagccagaggtt 928

                                                                        
Query: 121  atcattgttgcccctactagagagctcatcaaccagatttacctggaggccaggaagttc 180
            || || || ||||| || || ||||| ||||||||||| ||| |||| ||| ||||||| 
Sbjct: 929  attatagtggccccaaccagggagctgatcaaccagatctacatggaagcccggaagttt 988

                                   
Query: 181  gcctatgggacatgtgtgcgtcc 203
            ||| ||||||| |||||||||||
Sbjct: 989  gcccatgggacttgtgtgcgtcc 1011

>dbj|AB005147.1|AB005147 Danio rerio mRNA for vas, complete cds
          Length = 2865

 Score =  103 bits (52), Expect = 1e-19
 Identities = 207/256 (80%), Gaps = 2/256 (0%)
 Strand = Plus / Plus

                                                                        
Query: 313  ggaaagattgggctgactaaactgcggtactttgtgctggatgaggctgaccggatgctg 372
            ||||||||||| |||| |||| |||| ||  | || |||||||| || ||| | ||||||
Sbjct: 1334 ggaaagattggcctgagtaaagtgcgctatctagttctggatgaagcagacagaatgctg 1393

                                                                        
Query: 373  gacatgggctttgagcctgcgatggcgcaagctggtggggtccccaggcataccagctaa 432
            ||||||||||||||||| |  || |||||| ||||||| ||| || || || ||  | ||
Sbjct: 1394 gacatgggctttgagccagaaat-gcgcaaactggtggcgtctcctggtatgccttcaaa 1452

                                                                        
Query: 433  agaggatcgccagaccctaatgttcagcgctacctaccctgatgacatccaaaggatggc 492
            |||||| || || ||||| |||||||| || ||||||||||| || || ||||| |||||
Sbjct: 1453 agaggaacgacaaaccctcatgttcagtgccacctaccctgaagatattcaaagaatggc 1512

                                                                        
Query: 493  ggttgactttctcaaagacggactatttgttcctggctgtcggtgtggtgggcacagcct 552
             | ||||||||| ||||  ||||||| | ||||| ||||| |||||||||||   ||| |
Sbjct: 1513 tgctgactttcttaaag-tggactatattttccttgctgttggtgtggtgggtggagcat 1571

                            
Query: 553  gcagtgatgaggagca 568
            ||||||||| ||||||
Sbjct: 1572 gcagtgatgtggagca 1587

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 156/197 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggcttgtgcgcatacgggatctggtttaacggctgcattcctgctccctattctgcag 60
            ||||||||||| || || ||||| ||   |||||| || |||||||| ||||| || |||
Sbjct: 1022 atggcttgtgctcagactggatcaggaaaaacggcggccttcctgctgcctatcctacag 1081

                                                                        
Query: 61   cagttgatggctgacggtgtggcagccagttccttcagtgagctgctggagcctgaagca 120
            |  || ||| |||| ||||||||||||||    ||||||||| | | ||||||||| || 
Sbjct: 1082 cgctttatgactgatggtgtggcagccagcaagttcagtgagatacaggagcctgaggcc 1141

                                                                        
Query: 121  atcattgttgcccctactagagagctcatcaaccagatttacctggaggccaggaagttc 180
            || || || || || || ||||| || ||||| ||||| || ||||||||||||||||| 
Sbjct: 1142 ataatcgtggctcccaccagagaacttatcaatcagatctatctggaggccaggaagttt 1201

                             
Query: 181  gcctatgggacatgtgt 197
            || || ||||| |||||
Sbjct: 1202 gcatacgggacctgtgt 1218

>emb|Y12007.1|DRY12007 D.rerio vlg (vasa like gene) mRNA for putative RNA helicase
          Length = 2492

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 280/355 (78%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                        
Query: 313  ggaaagattgggctgactaaactgcggtactttgtgctggatgaggctgaccggatgctg 372
            ||||||||||| |||| |||| |||| ||  | || |||||||| || ||| | ||||||
Sbjct: 1251 ggaaagattggcctgagtaaagtgcgctatctagttctggatgaagcagacagaatgctg 1310

                                                                        
Query: 373  gacatgggctttgagcctgcgatggcgcaagctggtggggtccccaggcataccagctaa 432
            ||||||||||||||||| |  || |||||| ||||||| ||| || || || ||  | ||
Sbjct: 1311 gacatgggctttgagccagaaat-gcgcaaactggtggcgtctcctggtatgccttcaaa 1369

                                                                        
Query: 433  agaggatcgccagaccctaatgttcagcgctacctaccctgatgacatccaaaggatggc 492
            |||| | || || ||||| |||||||| || ||||||||||| || || ||||| |||||
Sbjct: 1370 agagaaacgacaaaccctcatgttcagtgccacctaccctgaagatattcaaagaatggc 1429

                                                                        
Query: 493  ggttgactttctcaaagacggactatttgttcctggctgtcggtgtggtgggcacagcct 552
             | ||||||||| ||||  ||||||| | ||||| ||||| |||||||||||   ||| |
Sbjct: 1430 tgctgactttcttaaag-tggactatattttccttgctgttggtgtggtgggtggagcat 1488

                                                                        
Query: 553  gcagtgatgaggagcagacatttgtccaggtcaccaagttctccaagagggagcagcttc 612
            ||||||||| ||| || ||  |||| |||||   | ||| ||| |||||||| ||||| |
Sbjct: 1489 gcagtgatgtggaacaaaccattgttcaggtggaccagtactcaaagagggaccagctgc 1548

                                                                   
Query: 613  ttgacctcctcaaaacaacaggaacggagcgtaccatggtgtttgttgagaccaa 667
            ||||  | |||| | ||||||| |  ||||| || ||||| |||||||| |||||
Sbjct: 1549 ttgaattgctcagagcaacaggtaatgagcgcacaatggtttttgttgaaaccaa 1603

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 155/197 (78%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggcttgtgcgcatacgggatctggtttaacggctgcattcctgctccctattctgcag 60
            ||||||||||| || || ||||| ||   |||||| || |||||||| || || || |||
Sbjct: 939  atggcttgtgctcagactggatcaggaaaaacggcggccttcctgctgcccatcctacag 998

                                                                        
Query: 61   cagttgatggctgacggtgtggcagccagttccttcagtgagctgctggagcctgaagca 120
            |  || ||| |||| ||||||||||||||    ||||||||| | | ||||||||| || 
Sbjct: 999  cgctttatgactgatggtgtggcagccagcaagttcagtgagatacaggagcctgaggcc 1058

                                                                        
Query: 121  atcattgttgcccctactagagagctcatcaaccagatttacctggaggccaggaagttc 180
            || || || || || || ||||| || ||||| ||||| || ||||||||||||||||| 
Sbjct: 1059 ataatcgtggctcccaccagagaacttatcaatcagatctatctggaggccaggaagttt 1118

                             
Query: 181  gcctatgggacatgtgt 197
            || || ||||| |||||
Sbjct: 1119 gcatacgggacctgtgt 1135

>gb|AF251800.2|AF251800 Danio dangila vasa-like protein mRNA, partial cds
          Length = 1198

 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 279/355 (78%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 313 ggaaagattgggctgactaaactgcggtactttgtgctggatgaggctgaccggatgctg 372
           ||||||||||| |||| |||| |||| || || || |||||||| || ||| | ||||||
Sbjct: 313 ggaaagattggcctgagtaaagtgcgctatttagttctggatgaagcagacagaatgctg 372

                                                                       
Query: 373 gacatgggctttgagcctgcgatggcgcaagctggtggggtccccaggcataccagctaa 432
           ||||||||||||||||| |  || ||||||||||||||  || || || || ||  | ||
Sbjct: 373 gacatgggctttgagcccgaaat-gcgcaagctggtggcatctcctggaatgccttcaaa 431

                                                                       
Query: 433 agaggatcgccagaccctaatgttcagcgctacctaccctgatgacatccaaaggatggc 492
           ||| || || || ||||| |||||||| || ||||||||||| || || ||||| |||||
Sbjct: 432 agaagaacgacaaaccctcatgttcagtgccacctaccctgaagatattcaaagaatggc 491

                                                                       
Query: 493 ggttgactttctcaaagacggactatttgttcctggctgtcggtgtggtgggcacagcct 552
            |  ||||| || ||||  ||||||  | ||||| ||||||||||| |||||   ||| |
Sbjct: 492 cgccgacttccttaaag-tggactacattttccttgctgtcggtgtcgtgggtggagcat 550

                                                                       
Query: 553 gcagtgatgaggagcagacatttgtccaggtcaccaagttctccaagagggagcagcttc 612
           ||||||||| |||||| ||  |||| |||||   | ||| ||| |||||||| ||||| |
Sbjct: 551 gcagtgatgtggagcaaaccattgttcaggtggaccagtactcaaagagggatcagctgc 610

                                                                  
Query: 613 ttgacctcctcaaaacaacaggaacggagcgtaccatggtgtttgttgagaccaa 667
           ||||  | |||| | |||||||||  || || || ||||| |||||||| |||||
Sbjct: 611 ttgaattgctcagagcaacaggaaatgaacgcacaatggtttttgttgaaaccaa 665

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 110/133 (82%)
 Strand = Plus / Plus

                                                                       
Query: 71  ctgacggtgtggcagccagttccttcagtgagctgctggagcctgaagcaatcattgttg 130
           |||||||||||||||||||    ||||||||| ||| |||||| || || || || || |
Sbjct: 71  ctgacggtgtggcagccagcaagttcagtgaggtgcaggagcccgaggcgataatcgtgg 130

                                                                       
Query: 131 cccctactagagagctcatcaaccagatttacctggaggccaggaagttcgcctatggga 190
           | || || ||||| |||||||| ||||| || ||||||||||||||||| || |||||||
Sbjct: 131 ctcccaccagagaactcatcaatcagatctatctggaggccaggaagtttgcatatggga 190

                        
Query: 191 catgtgtgcgtcc 203
           | ||||| |||||
Sbjct: 191 cctgtgtacgtcc 203

>emb|Y12819.1|DRRNAHELI Danio rerio p110a mRNA for putative RNA helicase
          Length = 3061

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 346  gtgctggatgaggctgaccggatgctggacatgggctttgagcc 389
            ||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 1374 gtgctggatgaagcggaccggatgctggacatgggcttcgagcc 1417

>gb|AF096248.1|AF096248 Lycopersicon esculentum ethylene-responsive RNA helicase (ER68)
           mRNA, complete cds
          Length = 1752

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 346 gtgctggatgaggctgaccggatgctggacatgggctttga 386
           |||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 824 gtgctggatgaggctgaccgcatgctagacatgggttttga 864

>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22
          Length = 94239

 Score = 52.0 bits (26), Expect = 4e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 352   gatgaggctgaccggatgctggacatgggctttgagcc 389
             |||||||| ||| |||||||||||||||| ||||||||
Sbjct: 35518 gatgaggcagacaggatgctggacatgggttttgagcc 35555

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                
Query: 352   gatgaggctgaccggatgctggacatgggctttga 386
             |||||||| ||| | |||||||||||||| |||||
Sbjct: 51953 gatgaggcggacagaatgctggacatgggttttga 51987

>gb|AF040045.1|AF040045 Anabaena variabilis RNA helicase (crhC) gene, complete cds
          Length = 1964

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 346 gtgctggatgaggctgaccggatgctggacatgggcttt 384
           ||||||||||| || ||||||||| |||| |||||||||
Sbjct: 892 gtgctggatgaagccgaccggatgttggatatgggcttt 930

>gb|AF188678.1|AF188678 Pisum sativum P72 DEAD box protein mRNA, complete cds
          Length = 2924

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 352  gatgaggctgaccggatgctggacatgggctttga 386
            |||||||| ||| |||||||||||||||| |||||
Sbjct: 1100 gatgaggcagacaggatgctggacatgggttttga 1134

>gb|AE003679.1|AE003679 Drosophila melanogaster genomic scaffold 142000013386035 section 4 of
              105, complete sequence
          Length = 229277

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 344    ttgtgctggatgaggctgaccggatgctggacatgggctttgagcc 389
              |||| |||||||||||||| || ||| |||||||||| || |||||
Sbjct: 225226 ttgtactggatgaggctgatcgtatgttggacatgggtttcgagcc 225181

>gb|AE004767.1|AE004767 Pseudomonas aeruginosa PA01, section 328 of 529 of the complete
            genome
          Length = 10344

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  gtgctggatgaggctgaccggatgctggacatgggctt 383
            |||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 8216 gtgctggacgaggccgaccgcatgctcgacatgggctt 8179

>gb|AF239691.1|AF239691 Drosophila melanogaster unknown gene
          Length = 2404

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 344  ttgtgctggatgaggctgaccggatgctggacatgggctttgagcc 389
            |||| |||||||||||||| || ||| |||||||||| || |||||
Sbjct: 1353 ttgtactggatgaggctgatcgtatgttggacatgggtttcgagcc 1398

>gb|AF218580.1|AF218580 Xenopus laevis p68 RNA helicase mRNA, complete cds
          Length = 2207

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 346 gtgctggatgaggctgaccggatgctggacatgggctttgagcct 390
           ||||| ||||| || ||| | ||||| ||||||||||||||||||
Sbjct: 795 gtgcttgatgaagcagacagaatgcttgacatgggctttgagcct 839

>ref|NM_004818.1| Homo sapiens prp28, U5 snRNP 100 kd protein (U5-100K) mRNA
          Length = 3237

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 349  ctggatgaggctgaccggatgctggacatgggctttgagcc 389
            ||||||||||| ||  ||||| | |||||||||||||||||
Sbjct: 1681 ctggatgaggcagataggatgattgacatgggctttgagcc 1721

>gb|AE000182.1|AE000182 Escherichia coli K-12 MG1655 section 72 of 400 of the complete
           genome
          Length = 10958

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 352 gatgaggctgaccggatgctggacatgggcttt 384
           ||||| |||||||| ||||| ||||||||||||
Sbjct: 604 gatgaagctgaccgcatgctcgacatgggcttt 636

>gb|AF026402.1|AF026402 Homo sapiens U5 snRNP 100 kD protein mRNA, complete cds
          Length = 3237

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 349  ctggatgaggctgaccggatgctggacatgggctttgagcc 389
            ||||||||||| ||  ||||| | |||||||||||||||||
Sbjct: 1681 ctggatgaggcagataggatgattgacatgggctttgagcc 1721

>emb|X56307.1|ECRHLE E.coli rhlE gene
          Length = 858

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 352 gatgaggctgaccggatgctggacatgggcttt 384
           ||||| |||||||| ||||| ||||||||||||
Sbjct: 319 gatgaagctgaccgcatgctcgacatgggcttt 351

>gb|L02123.1|ECORHLEA Escherichia coli putative ATP-dependent RNA helicase (rhlE), putative
            DNA helicase (dinG), YbiA, YbiB, and YbiC genes, complete
             cds
          Length = 8355

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 352  gatgaggctgaccggatgctggacatgggcttt 384
            ||||| |||||||| ||||| ||||||||||||
Sbjct: 1005 gatgaagctgaccgcatgctcgacatgggcttt 1037

>dbj|D90717.1|D90717 Escherichia coli genomic DNA. (17.9 - 18.2 min)
          Length = 15382

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 352  gatgaggctgaccggatgctggacatgggcttt 384
            ||||| |||||||| ||||| ||||||||||||
Sbjct: 2639 gatgaagctgaccgcatgctcgacatgggcttt 2671

>dbj|D90716.1|D90716 Escherichia coli genomic DNA. (17.6 - 18.0 min)
          Length = 20741

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 352   gatgaggctgaccggatgctggacatgggcttt 384
             ||||| |||||||| ||||| ||||||||||||
Sbjct: 17310 gatgaagctgaccgcatgctcgacatgggcttt 17342

>gnl|NCBIGenomeMrna|TR00012225 Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide, Y
            chromosome (DBY), mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 977  tggatatgatggaaagaggaaagattgg 1004

>gnl|NCBIGenomeMrna|TR00012224 Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide, Y
            chromosome (DBY), mRNA
          Length = 2289

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1283 tggatatgatggaaagaggaaagattgg 1310

>gb|AE003634.1|AE003634 Drosophila melanogaster genomic scaffold 142000013386055 section 27 of
              63, complete sequence
          Length = 264752

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 738    cgtgagcagcgggagcgagagcag 761
              ||||||||||||||||| ||||||
Sbjct: 121367 cgtgagcagcgggagcgggagcag 121390

>gb|AE003442.1|AE003442 Drosophila melanogaster genomic scaffold 142000013386054 section 26 of
              35, complete sequence
          Length = 306267

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 346    gtgctggatgaggctgaccggatgctggacatgggctttgagcc 389
              |||||||| || || ||||| |||||||||||||| || |||||
Sbjct: 123765 gtgctggacgaagccgaccgcatgctggacatgggtttcgagcc 123722

>ref|NM_020414.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 24 (DDX24),
            mRNA
          Length = 2971

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 350  tggatgaggctgaccggatg 369
            ||||||||||||||||||||
Sbjct: 1507 tggatgaggctgaccggatg 1526

>gb|AF214731.1|AF214731 Homo sapiens ATP-dependent RNA helicase (DDX24) mRNA, complete cds
          Length = 2971

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 350  tggatgaggctgaccggatg 369
            ||||||||||||||||||||
Sbjct: 1507 tggatgaggctgaccggatg 1526

>ref|NM_004660.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide, Y
            chromosome (DBY) mRNA
          Length = 4416

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1048 tggatatgatggaaagaggaaagattgg 1075

>ref|NM_001356.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 (DDX3)
            mRNA
          Length = 3158

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1292 tggatatgatggaaagaggaaagattgg 1319

>gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, complete sequence
          Length = 148280

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 296   tggatatgatcggaagaggaaagattgg 323
             |||||||||| | |||||||||||||||
Sbjct: 65395 tggatatgatggaaagaggaaagattgg 65422

>gb|AC006255.9|AC006255 Homo sapiens 3p21.1-9 PAC RPCI5-1087L12 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 81521

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 755   agagcaggctctggctgact 774
             ||||||||||||||||||||
Sbjct: 38832 agagcaggctctggctgact 38813

>gb|AF061337.1|AF061337 Homo sapiens DEAD box RNA helicase DDX3 (DDX3) mRNA, complete cds
          Length = 2201

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1058 tggatatgatggaaagaggaaagattgg 1085

>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones
             DS06189, DS04362, and DS07071, complete sequence
          Length = 170056

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 738   cgtgagcagcgggagcgagagcag 761
             ||||||||||||||||| ||||||
Sbjct: 18413 cgtgagcagcgggagcgggagcag 18390

>gb|AF000985.1|HSAF000985 Homo sapiens dead box, Y isoform (DBY) mRNA, alternative transcript
            1, complete cds
          Length = 2319

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1048 tggatatgatggaaagaggaaagattgg 1075

>gb|AF000984.1|HSAF000984 Homo sapiens dead box, Y isoform (DBY) mRNA, alternative transcript
            2, complete cds
          Length = 4416

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1048 tggatatgatggaaagaggaaagattgg 1075

>gb|AF000983.1|HSAF000983 Homo sapiens dead box, X isoform (DBX) mRNA, alternative transcript
            1, complete cds
          Length = 3408

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1839 tggatatgatggaaagaggaaagattgg 1866

>gb|AF000982.1|HSAF000982 Homo sapiens dead box, X isoform (DBX) mRNA, alternative transcript
            2, complete cds
          Length = 5322

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1839 tggatatgatggaaagaggaaagattgg 1866

>gb|U50553.1|HSU50553 Homo sapiens helicase like protein 2 (DDX14) mRNA, complete cds
          Length = 3158

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  tggatatgatcggaagaggaaagattgg 323
            |||||||||| | |||||||||||||||
Sbjct: 1292 tggatatgatggaaagaggaaagattgg 1319

>emb|Y18453.1|DM18453 Drosophila melanogaster dcy gene, exons 1 and 2
          Length = 2998

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 738  cgtgagcagcgggagcgagagcag 761
            ||||||||||||||||| ||||||
Sbjct: 1913 cgtgagcagcgggagcgggagcag 1936

>dbj|AK025162.1|AK025162 Homo sapiens cDNA: FLJ21509 fis, clone COL05745
          Length = 2963

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 350  tggatgaggctgaccggatg 369
            ||||||||||||||||||||
Sbjct: 1504 tggatgaggctgaccggatg 1523

>dbj|AB038268.1|AB038268 Tursiops truncatus IL-1RA mRNA for interleukin-1 receptor
           antagonist, complete cds
          Length = 1693

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 575 tgtccaggtcaccaagttct 594
           ||||||||||||||||||||
Sbjct: 526 tgtccaggtcaccaagttct 545

>dbj|AP001295.1|AP001295 Mus musculus genomic DNA, chromosome 7, clone:B96, complete sequence
          Length = 191373

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     tcagtgagctgctggagcct 114
              ||||||||||||||||||||
Sbjct: 134719 tcagtgagctgctggagcct 134738

>gb|J04847.1|MUSPL10A Mouse PL10 protein mRNA, complete cds
          Length = 1983

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  tggacatgggctttgagcct 390
            ||||||||||||||||||||
Sbjct: 1055 tggacatgggctttgagcct 1074

>gb|AE004483.1|AE004483 Pseudomonas aeruginosa PA01, section 44 of 529 of the complete genome
          Length = 10202

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 361  gaccggatgctggacatgggctt 383
            ||||||||||| |||||||||||
Sbjct: 3446 gaccggatgctcgacatgggctt 3424

>ref|NM_016222.1| Homo sapiens DEAD-box protein abstrakt (ABS), mRNA
          Length = 2090

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                               
Query: 349  ctggatgaggctgaccggatgctggacatgggctt 383
            ||||| ||||||||||| ||| | |||||||||||
Sbjct: 1025 ctggacgaggctgaccgcatgatcgacatgggctt 1059

>gb|AC000364.1|HSAC000364 Human cosmid g1346a186, complete sequence [Homo sapiens]
          Length = 37060

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 604   agcagcttcttgacctcct 622
             |||||||||||||||||||
Sbjct: 16591 agcagcttcttgacctcct 16609

>ref|NM_011842.1| Mus musculus metastasis associated 1-like 1 (Mata1l1), mRNA
          Length = 2942

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 409  ggggtccccaggcatacca 427
            |||||||||||||||||||
Sbjct: 1460 ggggtccccaggcatacca 1442

>gb|AF159259.1|AF159259 Mus musculus metastasis associated protein MTA2 (MTA2) mRNA, complete
            cds
          Length = 2942

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 409  ggggtccccaggcatacca 427
            |||||||||||||||||||
Sbjct: 1460 ggggtccccaggcatacca 1442

>gb|AF195417.1|AF195417 Homo sapiens DEAD-box protein abstrakt (ABS) mRNA, complete cds
          Length = 2090

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                               
Query: 349  ctggatgaggctgaccggatgctggacatgggctt 383
            ||||| ||||||||||| ||| | |||||||||||
Sbjct: 1025 ctggacgaggctgaccgcatgatcgacatgggctt 1059

>gb|AF167297.1|AF167297 Gallus gallus cytokine-inducible SH2-containing protein (CIS) mRNA,
           complete cds
          Length = 1262

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 346 gtgctggatgaggctgacc 364
           |||||||||||||||||||
Sbjct: 726 gtgctggatgaggctgacc 708

>gb|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 map 4q25, complete sequence
          Length = 161326

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     ctgctccctattctgcagc 61
              |||||||||||||||||||
Sbjct: 145448 ctgctccctattctgcagc 145466

  Database: nt
    Posted date:  Oct 24, 2000 12:49 AM
  Number of letters in database: -1,909,081,757
  Number of sequences in database:  695,795
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 923424
Number of Sequences: 695795
Number of extensions: 923424
Number of successful extensions: 64559
Number of sequences better than 10.0: 61
length of query: 832
length of database: 2,385,885,539
effective HSP length: 20
effective length of query: 812
effective length of database: 2,371,969,639
effective search space: 1926039346868
effective search space used: 1926039346868
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)